Many of the visitors landing here are looking for the Matrix and Experimental trees. As you’ll note much of the information has been removed pending a new strategy to keep FTDNA kit #’s secure by default. The Matrices were generated by a project scraper which would import publicly available SNP results. These were then plotted into an HTML table using the SNPs from the experimental tree.
As the vast majority of the kits in the charts were unaware their kit numbers were available, I made the decision to pull the charts after the dustup between Family Tree DNA and Gedmatch. There is validity to the privacy concerns of having kits displayed on third party resources like this. The data also becomes far less useful for genetic genealogy researchers who cannot tie an anonymized result back to the source. This will require some time to come up with an acceptable strategy.
The experimental trees have been retained however. All of the VCF / BAM data used define the structure remain, and donors are encouraged to notify me should they want their kit # to be anonymized.
Updates to the tree are on-hold pending completion of improvements to the hg38 realignment process.